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Hi,
I have followed the installation steps on here and am trying to get this to work on RStudio but I get the following errors when I try and run the test.fasta.
test 1,
heuristics = FALSE,
…
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I've been trying to use this program to run an MK test using VCF files from the 1000 genomes project. However, I'm getting some really strange results with this method, and I'm worried I may be doing …
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hi, I run the WGD using format.SoyC09.CDS.fasta and ormat.SoyC09.gff as my input file,here is my code:
wgd mcl -n 8 --cds --mcl -s format.SoyC09.CDS.fasta -o SoyC09.CDS.out
wgd ksd --n_threads 8 -…
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Dear @MatthewMah,
Could I know how to convert `v54.1.p1_1240K_public.snp` to aligned fasta format data?
Thanks.
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Would it be possible to add a feature to run meryl-lookup exclude/include on a BAM instead of a fasta and output BAM? This would be very useful for filtering reads from PacBio or ONT data in their or…
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Currently the NF1 GTF File matches the NM_001042492.2.fasta file.
However, I am still getting this error :
ERROR ~ Error executing process > 'STAR_GENOMEGENERATE (NM_001042492.2.fasta)'
Caused …
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More a clarifying question: We're attempted an open mod search using a non-uniprot database (a gi| formatted database and some other custom protein names) and getting odd results. Does MetaMorpheus re…
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What are we expecting to see in this data. eg Are there barcodes?
It appears to be a 1 GB fasta file (which is a bit odd as fasta does not have quality info) filename: `R2C2_Consensus.fasta`
seq…
sr320 updated
5 months ago
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I'm trying to use this command line to annotate several genomes in FASTA format that exist in a directory, but the problem is that it only annotates one genome
command line: prokka allgenomes/*.fn…
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I tried to build a reference genome. I got the following error:
> The following mandatory metadata missing from gtf: transcript_id, gene_id
> In addition: Warning message:
> In .local(con, format…