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i am trying to build and package trinityrnaseq for Archlinux. when running make i am getting following error. apparently its similar to issue #1025 which has been marked as fixed.
i am using gcc 1…
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1. [Integrating ChIP-seq with other functional genomics data](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5888983/pdf/ely002.pdf)
2. [2014-nature review-Identifying and mitigating bias in next-gener…
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Hi
Could you please add more information on how to install this tool using docker? e. g.
1) In step 3; Does docker include all dependencies such as Braker, interproscan, etc.? or they should be ins…
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Dear authors.
I know that intervar can point out the annovar db to be used internally by editing the confing.ini file, but in reality, this can only change the file to be downloaded. From here, I d…
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This is a request to update the "genome coverage" [[OBI:0001939](http://purl.obolibrary.org/obo/OBI_0001939)]
**New parent term:** sequence data [[OBI:0000973](http://purl.obolibrary.org/obo/OBI_00…
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Hi @brianjohnhaas
Q1: I want to use ctat-mutations to find RNA Editing events. I have **only** RNA Seq data. Does your implementation find most of the variants around all genomic regions or does i…
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Hi team,
I want to compare m6a levels between my samples among other analyses. I first ran m6anet to get sample level m6a output and didn't have the foresight and space to keep `f5c` `eventalign` f…
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Utility visualizations (or metadata visualizations) include tables, trees, and other summary visualizations that are often visualized together with genome-mapped data visualizations (often with coordi…
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Hello,
I am getting an empty CDS file from running gff2seq with no error message.
My command is `anchorwave gff2seq -i GCF_003119195.2_ASM311919v2_genomic.gff -r GCF_003119195.2_ASM311919v2_genom…
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script here -- https://hackmd.io/gfZKTstPS7SmS7Vi6TMqVw?view
video here -- https://www.youtube.com/watch?v=-h9qHHpA2vI&feature=youtu.be
feedback from olgabot:
Text size, fonts are all good
J…