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R CMD CHECK passes with latest commit but gives a note about the high number of used packages (28):
```
* checking package dependencies ... NOTE
Imports includes 28 non-default packages.
Import…
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Hello, I installed the package from Github and tried to run the examples shown in the help documentation for 'ggcoverage()'. Here is the code I ran and the error I got.
```
library(ggcoverage)
l…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/Oshlack/Damsel
Confirm the following by editing e…
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I have a merged Seurat object (6 samples) of multiome (GEx and ATAC) data:
```
An object of class Seurat
171105 features across 11666 samples within 4 assays
Active assay: peaks (88220 features,…
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Might be related to "print" issues:
https://github.com/r-lib/actions/issues/319#issuecomment-863992073
https://github.com/r-lib/devtools/issues/2407
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Dear Tobias,
I am trying to install the latest circtools installation and I managed to do it using pip install. However, when I try to install the R packages using `circtools_install_R_dependencies…
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Hi,
Sorry to ask my question in the issue.
Any chance that ggbio "is/will be" able to display label (via geom_text?) contained as metadata of a Granges object?
Or is there an alternative?
Thanks,
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Hi Bernat!
Thanks for the publishing this powerful visualization package. It has been quite a lot useful and easy to use than LocusZoom.js and ggbio, honestly. I had query if I can plot kpLines on…
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Hi
I am trying to get ggcoverage up and running, looking single nucleotide level.
I have installed the package and required dependencies without problems.
I will use the code in the vignette as…
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Hello I am working on the [2021 Integrating scRNA-seq and scATAC-seq data Tutorial](https://satijalab.org/seurat/articles/atacseq_integration_vignette.html)
Everything has worked until the quantify…