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Is it possible to use HiFi PacBio reads?
Best,
André
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Hi I am working on a triploid species which is highly heterozygous, see genomescope plot
http://qb.cshl.edu/genomescope/genomescope2.0/analysis.php?code=nnC4CPmgLE3605rbyM7y
My data is Hifi and …
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**Describe the solution you'd like:**
A convolution reverb in the effect lane.
This has already been discussed in surge discord, but though I could post it here as well as a reminder.
A convolu…
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Dear developer,
1) If I use hifiasm+hifi data+ont data as the main assembly. I wonder if I cound use the assembled contigs by other tools like nextdenovo, verkko, hicanu as the input file for "--read…
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Do you have an estimate on the runtime on CCS reads based on the current version?
In your study you mentioned that It's suppose to be 3 times faster than the standard whatsapp-Deepvariant approach.…
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The title says it all.
I have high accuracy nanopore data with read N50 of >100 kb (representing >30-50X coverage) and I would like to try minimum overlaps of 25kb and 50 kb, but get this error:
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