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ruanjue
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wtdbg2
Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly
GNU General Public License v3.0
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contig size doubled when doing local assembly
#270
volcano1998
closed
1 month ago
1
adjust parameters to improve assemblies.
#269
dgs108
opened
2 months ago
0
Phased assembly with wtdbg2 available?
#268
Jerry-is-a-mouse
opened
2 months ago
1
parameters for nanopore Q20 reads
#267
bernardo1963
opened
2 months ago
1
Description in 'About' mismatch
#266
jowodo
opened
6 months ago
0
Error message 'died at line 29'
#265
parima678
opened
8 months ago
4
Support Linux aarch64
#264
martin-g
opened
9 months ago
1
Can I adjust the parameter "-l" when I use --load-alignments?
#263
Neo-xbx-00
opened
9 months ago
0
the estimate of running time
#262
ghost
closed
11 months ago
1
Recomendation for AT-high and very repetitive genome
#261
V-JJ
opened
1 year ago
0
CCS data assemble far too small
#260
fkyoung1992
opened
1 year ago
4
contigN50 too small
#259
shiyi-pan
opened
1 year ago
13
".cns.fa" output
#258
asylvz
closed
1 year ago
1
C++/ Python library
#257
Lionward
closed
1 year ago
1
Only one sample or multiple samples can be used in wtdbg2?
#256
Neo-xbx-00
opened
1 year ago
1
adjustable parameters with --load-alignments
#255
rwhetten
opened
1 year ago
3
Ambiguous bases
#254
OliverPStuart
opened
1 year ago
1
No Consensus ctg.fa file created
#253
lucyintheskyzzz
opened
1 year ago
5
No such file: assembly.events
#252
ykc21e8
opened
1 year ago
4
Died at /home/synbiolab/SoftWares/wtdbg2/wtdbg2.pl line 25.
#251
WHEREISSHE
opened
1 year ago
2
Different contig numbers and contig length generated!
#250
cheehowteo
opened
1 year ago
1
wtpoa-cns polishing details
#249
V-JJ
opened
1 year ago
9
Runtime Issue with warnings
#248
ghost
opened
1 year ago
5
Wtdbg2: Parameter -g setting problem
#247
17863952296
closed
1 year ago
2
Enquiry about the parameter "-m"
#246
cyr20040123
opened
1 year ago
3
I dont find wtpoa-cns script
#245
jccolon84
closed
2 years ago
0
Parameters for assembling short sequences (generating small assemblies)
#244
javiercguard
closed
2 years ago
2
wtdbg2对杂合度以及重复序列敏感度的问题
#243
Neo-xbx-00
closed
2 years ago
1
wtpoa-cns状态长时间不更新
#242
Neo-xbx-00
closed
2 years ago
4
Separation of contigs by long deletions
#241
ziczhang
closed
2 years ago
3
Using wtdbg2 to assemble phased haplotypes
#240
Redmar-van-den-Berg
closed
2 years ago
2
Parameters for triploid HIFI
#239
ptranvan
opened
2 years ago
3
Re-using kbm2 mapper
#238
anuradhawick
opened
2 years ago
1
How Wtdbg2 binning the reads? / How to restore the base sequence from binned sequence?
#237
cyr20040123
closed
2 years ago
4
Error correction
#236
gubrins
closed
3 years ago
1
Any news on a Mac release?
#235
proukakis
closed
3 years ago
1
kbm2 alignments and wtdbg2
#234
joanam
closed
3 years ago
3
Specify amount of memory (RAM) to be used
#233
Sabryr
opened
3 years ago
10
How does wtdbg2 deal with chimeric/siamaeric reads?
#232
A-J-F-Mackintosh
closed
3 years ago
2
Consensus step : genome size lower than pre-consensus stage
#231
shri1984
opened
3 years ago
10
Parameter choice for big, repetitive genomes
#230
sighe
opened
3 years ago
1
Long runtime - choosing correct parameters
#229
ctxchris
opened
3 years ago
5
Simultaneous assembly of two similar genomes
#228
lamenace91
closed
3 years ago
4
added SAM cleaning
#227
kullrich
closed
3 years ago
3
参数设置调整
#226
kuangtianhui
opened
3 years ago
4
min length of alignment -l
#225
shri1984
opened
3 years ago
1
Circularization?
#224
Boston1212
opened
3 years ago
4
参数使用问题
#223
azure-twilight
opened
3 years ago
2
Change input fastq sequence length cutoff
#222
zeng22
opened
3 years ago
1
version of wtdbg2 in conda
#221
shri1984
opened
3 years ago
1
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