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### Version
1
### DataCap Applicant
Lucas Tang
### Project ID
5
### Data Owner Name
ENCODE Data Coordinating Center
### Data Owner Country/Region
United States
### Data Owner Industry
Life …
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Hi,
currently only the hg19 and hg38 human genome builds appear to be supported by this pipeline.
It would be great if support for other species could be added!
I'm particularly interested in usi…
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I have come across to code to possibly streamline this notebook.
We should look at updating and making this notebook more robust..
https://github.com/RobertsLab/code/blob/master/10-blast-2-slim.i…
sr320 updated
5 years ago
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**What is the SO term name and accession?**
gRNA_gene (SO:0001264)
**Describe what you would like to change.**
Current def is "A noncoding RNA that guides the insertion or deletion of uridine res…
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I am trying to use estimateCellCounts2 on an RGset of 450k probes, however, I am getting the error: Error in match.arg(referencePlatform): 'arg' should be “IlluminaHumanMethylationEPIC”. However, my …
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Hi, Illumina discontinued the earlier version of the EPIC array. Can you suggest a way to use RnBeads with EPIC v2.0 data?
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I just spotted that some of the PMID publication in Canto are actually in Bioarchive, so
1. Do we want authors to be able to curate pubs when in BioArchive (I think yes, if they want to- pre publ…
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### Data Owner Name
ENCODE Data Coordinating Center
### Data Owner Country/Region
United States
### Data Owner Industry
Life Science / Healthcare
### Website
https://www.encodeproject.org/
###…
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GO:0090308 regulation of DNA methylation-dependent heterochromatin formation
GO:0090310 negative regulation of DNA methylation-dependent heterochromatin formation
GO:0090309 positive regulation of D…
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Hi everyone,
I have a question about the difference between --h2 and --h2-cts flags. I know that h2-cts is used to partition heritability to cell-type-specific annotations and LDSC performs a one-s…