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Hi @tobiasrausch
Thanks for developing and maintaining `tracy`. I've just discovered your tool and started trying it out, especially within a workflow manager like [nextflow](https://nextflow.io/).
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As per the Slack discussion [here](https://nextflow.slack.com/archives/C02T97HAV5M/p1696986142936759) I discovered that Nextflow containers meant for usage on AWS Batch should not be built on an Alpin…
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Seems that version 5.5.4 of meme is broken since I am getting weird results when trying to run `sea`. 5.5.5 original docker image works with the same command, but that cannot be used in nextflow, sinc…
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### Description of feature
aspera from ena link may be faster than ftp
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**Time:** 0.2 day (3 hours)
**Description:** Create a representative subset dataset of paired T/N fq and bams for 2 samples to ensure parallel tasks are being executed correctly, sampleIDs and files…
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### What happened?
Status of pods can become "OutOfCpu" when many pods are created and completed in a short time on the same node.
### What did you expect to happen?
Status of pods should become "R…
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Following the GATK4 guidelines here https://gatk.broadinstitute.org/hc/en-us/articles/360035531132--How-to-Call-somatic-mutations-using-GATK4-Mutect2#:~:text=The%20three%20steps%20to%20create%20a%20pa…
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- Review and update contents of Rmd as needed
- Put notebook on github for others to use
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**Is your feature request related to a problem? Please describe.**
Hey team, I have been deploying Singularity as the HPC container runtime as staff at the Pawsey national centre (AUS) for 4+ years…
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### Description of the bug
It looks like the workflow is trying to access the "NO_FILE" placeholder as if it were a real file, leading to a NoSuchFileException, and then:
> ERROR: No results repor…