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I am not sure, if here is a right platform to ask this question. But I was wonder, how much the data from your lab (Zackular, et al 2014) is comparable to this cohort; Thanks again for making your pap…
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Would it make sense to be able to do arithmetic on the kde objects, e.g. to add and subtract them, for comparing distributions?
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Hey
This is a great tool!!!!
I used https://fbmn-statsguide.gnps2.org/
It is nice that you have (global) PERMANOVA in the workflow. Is it possilble that you could please include pairwise PERMANO…
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Hi,
I've plotted bray-cutis beta diversity (PCoA) and need to change the labels. I've done this for other plots in ggplot using a code like this:
```{r}
relabunbray.ord$Site
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We need classes for many of the core types of data dealt with in QIIME. A lot of these classes may end up in scikit-bio or biom-format, but it'll be useful to get a list started here.
Once implement…
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Our apps run some serious computations that are worth explaining a bit to the user. Also we've had user feedback asking for more details on the functions we use for the computations, etc. So, we'd lik…
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When looking at the [disturbance list](https://docs.google.com/a/nau.edu/spreadsheet/ccc?key=0AszoyIf-SUHrdHAxSFRtTUVtUHU5R3EwNDdaMGZ5LWc#gid=1), do disturbances reported in this list correlate with t…
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I updated our code from Java 10 to Java 11 and a bunch of warnings appeared in SpotBugs:
```
DMC_DUBIOUS_MAP_COLLECTION
NP_LOAD_OF_KNOWN_NULL_VALUE
PCOA_PARTIALLY_CONSTRUCTED_OBJECT_ACCESS
RCN_…
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Hi,
I am trying to change the line types for the ellipses based on my Treatments. Here are the commands I am using:
PCG.ord
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Hello,
I am running alph_rarefraction.py for one of my sample. But i am getting an error. The Matrices generations running successfully. But after that, alpha diveristy plots are not creating. it gi…