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Not super high priority, but for discussion... I could have sworn there was already a ticket for this but ...
for phenotype pages, I think it would be interesting to have a tab with other phenotypes …
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In todays call we decided tentatively to add bird phenotypes directly to uPheno.
I was also recommended to check out these resources and possibly reach out to @caripark who has some experience deal…
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Fix Phenotype, allowing users to manually flip on/off Phenotype Service flags.
**Describe the solution you'd like**
The ability for users to add Phenotype Service flags per app, much like Firefox'…
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This issue imported from the [Chado v1.4 requested changes](https://docs.google.com/document/d/1t_Jb4XxUPtgGRSKtznsqvjTjmR4vpFHPQROMQ0OZK9A/edit) google doc:
http://gmod.827538.n3.nabble.com/propos…
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Expected Behavior
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Create a generic data file parser that could be used with all of the file upload functions that will s…
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Or maybe call it "Variant", since it will be a variant-centric view? To be defined.
It would make a standard PheWAS plot, aggregating the p-values of a particular variant across all phenotypes.
We…
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Expected Behavior
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If there are repeat measures for a specific observation unit/trait combo, then the phenotype download w…
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I want to compute LDSC heritability and genetic correlation of a genome-wide meta-analysis including repeated observations and I was wondering what value for sample size I should use.
For example,…
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Hi, I am trying to run GEM analysis, but it keeps showing an error about phenotype file. I have attached my code here. Do you know what is my problem here?
singularity exec \
> -B /humgen/ManningL…
lc491 updated
2 months ago
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Generate JSON Mapper for a pleiotropy chart like the ones on the landing pages for the phenotypes