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In the `viewerTop.json` file the `units` value is set to `ANGSTROM` but the frame files' XYZ coordinates are all in `NANOMETERS`.
```
// viewerTop.json
{
"units": "ANGSTROM",
"atoms": [
…
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We would like to map the enzymes in Sandbox to reactions in Rhea. One possible pathway:
* Enzymes in Sandbox have UniProtAcc
* From UniProt get the EC number for this protein
* With the EC number w…
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```
---------------------------------------------------------------------------
ValueError Traceback (most recent call last)
Cell In[2], line 1
----> 1 model = esm.p…
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I am trying to import Peptide from qiskit_research by using this code:
from qiskit_research.protein_folding.peptide.pepetide import *
But I am getting this error:
No module named qiskit_resea…
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Such as:
https://github.com/mlcommons/hpc
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[Fly-N-paper](https://gwu0.sharepoint.com/:f:/r/sites/GlyGenTeam-GRP/Shared%20Documents/Paper%20Curation/PMID%C2%A017264077%20Fly-N?csf=1&web=1&e=8HPrTO)
**Tasks for Anh**
* #414
**Tasks for S…
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Protein deacetylases were classified as hydrolases. However, as pointed out by @kaxelsen in #22833, not all protein deacetylases are hydrolases; the NAD-dependent are transferases.
This is a nice…
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Hello,
I modified alphafold so that it takes my own custom template features. I would like to modify it again so that it runs without MSAs features. Is there any convenient way to do this ?
Does s…
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Hello,
The GO-CAM specifications use only 'has_input'; not 'has_direct_input'.
We will get the annotations updated in Protein2GO; for groups not using this extension, please update your annota…
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Jack and Kodi go 5 days a week -- I added a constraint to Kodi (needs to be pickedup after 10) but no contraint to Jack. Jack lives next door to Kodi but for some reason the walker doesn't pick them …