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Hello,
I am trying to load new PTM on centos7 cluster as discussed in this thread but cant seem to get this done right. I looked at solution in #299 but cant sem to get this working. Here is the co…
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The main goal here is for each resource to serve whatever data they have via the same exact API, but we should NOT just be limiting to ProteomeXchange data. Release to issue #7
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We will use the Open-api 2.0 because code autogeneration is supported by many tools.
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Hi guys,
We have just submitted some data, 3 sets of 150 raw files. Did I miss how to do multiple selection in the table when linking raw files to an id file? It is really a pain to select 3 times 15…
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We do not support mzIdentML files which referencing raw files
http://www.ebi.ac.uk/pride/help/archive/faq#mzid-with-rawfiles-only
This should be checked for and prevented at the time of making a 'comp…
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Below is some sample JSON that we would tentatively output from the /datasets API endpoint. The dataset used in this example is live in both MassIVE and ProteomeCentral, and can be found at the follow…
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# Describe the problem
* **I'm submitting a:**
- [ ] problem running the software
- [ ] bug report
- [ ] feature request
- [x] question
* **My MSFragger use case:**
- [ ] _Closed_…
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@germa @edeutsch :
Can we make sure the following files are included in the PSI-MS ontology, for the file types:
- [ ] Quantification file URI
- [ ] FASTA file URI
- [ ] Spectrum Library f…
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Validation of mzTab files fails if the `title` field is missing in the metadata section (for a complete submission).
The mzTab specification indicates that this is an optional field though.
The lo…
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Hi guys,
I've processed a lot of data using the dinosaur and it works fine for Elite, QExactive and Velos Orbitrap data. Hovewer, there are an extremely low number of detected peptide features for Or…