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This is exactly the tool I have been dreaming of. However, I still have a few questions to ask:
Is it suitable for WGBS data?
Based on the same input format, can I use the matrix of ATAC-seq, ChIP…
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Please provide as much information as you can:
* **Suggested term label:**
cis-acting lncRNA mediated co-transcriptional gene silencing
* **Definition (free text)**
see below
* **Par…
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Description: I propose adding a new function molecular_weight() to the BioSequences package that calculates the average or monoisotopic molecular weight of a protein or nucleic acid sequence. The func…
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### Description of feature
Just wanted to put it down and mention that I am currently working on the implementation of cellranger-arc (modules + subworkflow). Maybe worth to discuss if this is fine t…
heylf updated
9 months ago
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Hello all,
Just wanted to let people know what tools I'm working on (or might work on in the future), in case anyone else is interested in these.
I'm concentrating on RNA-seq/ChIP-seq/ATAC-seq wo…
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UPDATE: at the last single-cell curators call (May 11th 2022), @dosumis suggested to have a meeting/discussion to review and improve the branches most used by Annotare and Expression Atlas, and involv…
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@rawnakhoque I asked the PDF in our lab and he showed me that everything has been done in bash. Follow the installation and basic configuration step by step [here](http://homer.ucsd.edu/homer/introduc…
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Hi,
I am trying to run the following command on some fast5 file to do a 6mA methylation analysis.
```
megalodon raw_fast5s/ \
--guppy-server-path /home/nataly/nanopore/ont-guppy-cpu/bin/guppy_b…
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### What is the title of the roadmap you are submitting?
Roadmap to Bioinformatics
### Roadmap Link
# Bioinformatics Roadmap
**0. Why Bioinformatics?**
- **What is Bioinformatics?** Bioinfo…
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Hello,
Thank you for developing EpiSCORE. I have been using it to calculate the proportion of cell types making up healthy prostate as well as prostate tumour samples and so have been using mrefPro…