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Beginning with sequence-based searches of the literature via PaperBLAST and using the sequences acquired from PomBase, UniProtKB
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Please, describe below the problem you think we face in the miRNA/isomiR naming.
Try to summarize it in 200 words. The current discussions are here:
* isomirs : https://github.com/miRTop/incubat…
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Hello,
I utilised RNApolis to obtain the Dot-Bracket annotations of RNA structures (in cif format) and I stumbled on the following errors:
```
File "/home/branimir/anaconda3/bin/annotator", lin…
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Find each class of failure and report to Nigel and Dorothee so that we can decide what to do in each case.
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# Background
New library construction technologies, especially highly multiplexed assays like single-cell RNA-seq, employ a large variety of library molecule configurations. These configurations inse…
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Hello Jens,
I tried to use gemoma to annotate the genome and
the input format for gff file is the same as the test data so I don't understand why it didn't work out
java -jar GeMoMa-1.9…
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[GROMACS tutorial](http://www.mdtutorials.com/gmx/complex/01_pdb2gmx.html )
[GROMACS in the Cloud: A Global Supercomputer to Speed Up Alchemical Drug Design](https://doi.org/10.1021/acs.jcim.2c0004…
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We resubmitted version [0.10](https://github.com/greenelab/deep-review/releases/tag/v0.10) to the _Journal of the Royal Society Interface_ and *bioRxiv*. Thanks everyone for all the great work on the…
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### Is there an existing module for this?
- [X] I have searched for the existing module
### Is there an open PR for this?
- [X] I have searched for existing PRs
### Is there an open issue for this…
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An extraordinary BA.2 sequence was collected from Ontario, Canada, on August 2023. One of its most distinctive aspects was S:I651V, a 2-nucleotide mutation (though it only requires one). Another astou…