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KP.2.15(DeFLiRT)+T12304C+A3580G, T9418C, C23277T(S:T572I), another FULL QUAD branch.
GISAID query: C23277T, T12304C, A10861G, G17334T
No. of seqs: 19(Denmark 4 Germany 1 Sweden 9 USA 5(1 from Germ…
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KP.1.1.3+G22021T(S:M153I)
GISAID query: C4999T,G22021T,G24872T
GISAID query for S:C1247S branch: C4999T,G22021T,G24872T,G25302C
No. of seqs: 20(France 1 India 1 UK 1 Canada 1 Sweden 1 Spain 1 US…
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KP.1.1.3+C3992T+C25350T(S:P1263L)
GISAID query: C3992T, C4999T, C25350T,del21653
No. of seqs: 7(USA 5(2 from UK), Spain 1 UK 1 )
First: EPI_ISL_19153965, USA, 2024-5-3
Latest: EPI_ISL_19254598…
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KP.2.3+C28714T+C2434T, G17325A,G21776A,C28054T(S:G72R,Orf8:S54L)
GISAID query: C28714T, G21776A, C28054T
No. of seqs: 6(Ireland 1 Canada 1 USA 1 Spain 1 UK 2)
First: EPI_ISL_19211045,Canada, 20…
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From branch 33 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/1502
KP.2.5+C592T+C2377T, del21653_21655(Orf1a:N704K,S:S31del)
GISAID query: T592C,T2377G,A22115G
No. of seqs: …
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LF.2+T4660C+G26888A+C3743T,C14491T, C22329T(Orf1a:H1160Y, S:S256L)
GISAID query: G26888A,C22329T,C3743T
No. of seqs: 22(Canada 1 Netherlands 1 USA 2(from Germany) France 18)
First: EPI_ISL_1918…
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transferred from: https://github.com/sars-cov-2-variants/lineage-proposals/issues/1653
![image](https://github.com/user-attachments/assets/d2a20d2c-531c-4dc8-bd3b-9df2b31961bc)
tree: https://nextstr…
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S:F59L is usually achieved via T21737C, however, this branch gets it by T21739G.
KP.2+T6844C, C28603T+T21739G(S:F59L)
GISAID query: T6844C, C28603T, T21739G
No. of seqs: 41(Australia 1 Canada 6…
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**Defining Mutations:** `KP.2.2` > `T24364C(S:I934I)` > `G25455T(ORF3a:K21N)` > `C7594A` > `C2638T, C21627A(S:T22N), G23401T(S:Q613H)`
**Query:** `C2638T, C7594A, G23401T`
**Earliest seq:** 24-07-14…
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KP.2.3(with S:S31del)+C21816G(S:P85R)
GISAID query: C22000A,C21816G,G25593T
No. of seqs: 17(Denmark 1 UK 1 France 1 India 2 Japan 1(from Poland/Germany) Luxembourg 3 Portugal 2 Spain 2 USA 4(2 fro…