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Would you please help me to figure out the problem with BSR Pre_processing. For the step 4 I get this error:
ddl.pp.assign_isotypes(samples, blastdb = "/Users/saramoein/Downloads/dandelion-master/c…
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@stephencheunghk posted in #5:
> Hello,
> I got an error message when I open the 2.8.2.1 software after installation on a windows 10 workstation.
> Please advise if there is solution to it?
>
…
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I am trying to identify MITE in a published genome sequence using MITEFinder II in Ubuntu14.04 LTS OP system. The following script was used:
./miteFinder -input my/fast/file.fa -output my/mitefinde…
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Hi There,
I am getting about 1/3 of my OTU assigned taxonomy (output) from BLCA (2/3 "unassigned"). In some cases, those OTU/sequences have poor or no match to the blast database provided and even …
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Hi,
I have been getting this error
```File "pandas/_libs/parsers.pyx", line 801, in pandas._libs.parsers.TextReader.read_low_memory
File "pandas/_libs/parsers.pyx", line 857, in pandas._libs.par…
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Hello!
I'm trying to check the quality of my De Novo Assembly with rnaQUAST installed with conda. When it is getting the reference genome this happend:
---
System information:
OS: Linux-5.11.0-4…
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Hi,
Is it possible to use BLASTn instead of legacy blast for performing orthomcl analysis? In other words how can I supply all-to-all blast results to Blast_all_vs_all_repo_to_OrthoMCL.pl?
thanks …
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Hi @oschwengers,
Thanks again for recommending the `platon` tool, this is exactly what I was looking for.
I just wanted to double check the interpretation of the results with you, below is the ver…
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Hi,
I think there is a mistake in the CountAssemblyStat.py invocation from Assembly.sh resulting in:
> Error : no distribution -d defined, process broken
I've added the missing "-d" option:
…
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Hi,
I'm playing with Cenote-Taker2 for the first time, and (as far as I can tell) it keeps hanging: i.e. simply stopping execution with no feedback or continued output or execution. There are a co…