qunfengdong BLCA issues

qunfengdong / BLCA

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issues

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multithread running

#38 CaiWang0503 opened 1 week ago
0
Error with alignment

#37 MarineBio-LKRod opened 11 months ago
10
Error Unknown option clw (solved)

#36 lakarstens opened 1 year ago
1
BLAST Database error: Not a valid version 4database

#35 nana-marinbio opened 2 years ago
0
command not found

#34 nana-marinbio closed 2 years ago
12
why unclassified

#33 CaiWang0503 opened 2 years ago
1
link for SILVA LSU database doesn't work

#32 CaiWang0503 opened 2 years ago
4
Assignment not making sense

#31 shump2 closed 2 years ago
11
no assignment for OTU with numerous blast matches, even after relaxing blastn filtering criteria (e.g. % identity, evalue, aln len)?

#30 lplough closed 2 years ago
6
ValueError: max() arg is an empty sequence

#29 lplough closed 2 years ago
12
ValueError: max() arg is an empty sequence | blastn issue

#28 shump2 closed 2 years ago
3
18S data

#27 tmurillocorrales opened 2 years ago
2
Number of threads error

#26 erin-d closed 3 years ago
2
Treshold

#25 bvalot closed 3 years ago
2
Help~ Python bug

#24 hiwasax opened 4 years ago
11
Update 2.blca_main.py

#23 ghost closed 4 years ago
0
BLCA output table is not always consistently formatted (makes downstream parsing challenging)

#22 wolfgangrumpf closed 4 years ago
3
weird sequence

#21 qinglong89 closed 4 years ago
1
July 8 2019 release - does it REQUIRE Blast 2.9.0?

#20 wolfgangrumpf opened 5 years ago
9
ValueError: max() arg is an empty sequence"

#19 dswan closed 5 years ago
5
updates from blca

#18 dswan closed 5 years ago
1
BLCA scoring always seems to return "100" at species level score

#17 dswan closed 5 years ago
7
Dealing with subspecies in taxonomy mapping

#16 dswan closed 5 years ago
4
BLCA with Silva 23S LSU database?

#15 wolfgangrumpf closed 4 years ago
5
I am interested in parallel BLCA. I tried splitting the FASTA input..

#14 wolfgangrumpf closed 5 years ago
6
ValueError: max() arg is an empty sequence" error

#13 aboffin closed 5 years ago
6
Update 2.blca_main.py

#12 koopkaup closed 5 years ago
4
Use python 3

#11 koopkaup closed 5 years ago
1
max() arg is an empty sequence error when using Greengenes reference

#10 aboffin closed 5 years ago
2
Candidate phylum NC10 missing from taxonomy

#9 koopkaup closed 5 years ago
3
Clustal alignment tool instead of muscle

#8 koopkaup closed 5 years ago
2
Shebang should be python2 and not python

#7 danlooo closed 5 years ago
1
Error writing output: ValueError: max() arg is an empty sequence

#6 Talitrus closed 6 years ago
2
ValueError: max() arg is an empty sequence

#5 pmhenry closed 6 years ago
3
##Taxomomic result at species, but The score is too small?

#4 penglbio closed 6 years ago
1
TypeError: range() integer end argument expected, got float

#3 duxuhao closed 6 years ago
3
How do I train the classifier with my own database of fasta files?

#2 TurbulentCupcake closed 5 years ago
11
Error: IndexError: list index out of range

#1 complexgenome closed 5 years ago
5