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I accidentally used my google account so this shows as community curated, could you merge again (sorry)
https://www.pombase.org/reference/PMID:34572495
2. This page does not show the singl…
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On the call we decided to check the genotype backgrounds and remove anything that shouldn't be there.
Here are all the backgrounds: [all_genotype_backgrounds-2020-06-19.txt](https://github.com/pomb…
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The PomBase curated input file (`pombase_disease_associations_mondo_ids.txt`) has six columns:
- gene systematic ID
- gene name
- MONDO term ID
- evidence code (always blank)
- refere…
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Well, it looks like it's time to revive the issue of using transcript isoform IDs (not needed back when #236 was open). As noted in the [Canto ticket](https://github.com/pombase/canto/issues/2351) and…
mah11 updated
2 years ago
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From #869
Add an "eco_evidence_code" property to each `feature_cvterm` row.
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https://curation.pombase.org/dumps/latest_build/logs/log.2021-09-26-21-52-06.gaf-load-output
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Hasn't been through canto
http://www.ncbi.nlm.nih.gov/pubmed?term=15147268
binding of skp1 with:
cul1/SPAC17G6.17/O13790 3
pof5/SPAC6F6.02c/O14235 3
pof6/SPCC18.04/O74854 3
pof3/SPCC338.16/O74991…
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We had some (japonicus) community curation for WT features. The author stated
"This article shows certain factors, such as cAMP level, temperature which can influence hyphal growth of S.japonicus…
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NEW normal protein localization to kinetochore during mitotic spindle assembly checkpoint signaling
have
FYPO:0005300 | decreased protein localization to kinetochore during mitotic spindle assem…
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It seems that bcbio-gff got added both as bcbiogff and bcbio-gff. The pypi name is bcbio-gff so I suggest we keep using that and get rid of bcbiogff even if it was added first.
The following recip…