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### Is your feature request related to a problem? Please describe.
_No response_
### Are you looking for hardware support?
_No response_
### Describe the feature you want
To support rebasing 9axi…
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### Week 1 - Get to know the community
- [X] Join the communication channels
- [X] Open a GitHub issue (this one!)
- [X] Install the Ersilia Model Hub and test the simplest model
- [X] Write a motiva…
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### What container were you trying to use, and how were you attempting to use it?
CC @jvhagey - have you encountered this error before?
When using `staphb/phyml:3.3.20220408` docker image, I got a…
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Hi! I ran into an error during the Phyml step. Please see below:
```
Error executing process > 'PHYML (1)'
Caused by:
Process `PHYML (1)` terminated with an error exit status (132)
Command …
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I came across this case where optim.pml will hang infinitely with a small data set (attached as RDS).
```
library(phangorn)
d = readRDS("fitGTR_test_data.rds")
set.seed(1234)
#debug(phangorn::…
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This thread is for collecting a list of useful models as options to choose from.
For now, we only consider Models that are evaluated (see the full list [here](https://www.sbert.net/docs/pretrained_mo…
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Hi raxml-ng team
I am trying to set topological constraints on the tree based on the taxonomic assignment of some of the tips. The alignment is 246bp for 3541 taxa.
The command I am running is: …
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Greetings! Thank you for the well-supported re-implementation of raxml.
When attempting to parse an alignment, I am consistently running into a segmentation fault with V1.0.2.
This has reproduce…
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Will be going out around 13th October- please comment with any content you'd like included
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Hi,
I have ran raxml-ng using the following command, so I get the bootstrap confidence values in my phylogenetic tree:
`raxml-ng --all --msa $file --model GTR+G --tree pars{10} --bs-trees 100`
…