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A user reported an error while running Meryl ([original post](https://help.galaxyproject.org/t/possible-error-in-meryl/6337?u=gallardoalba)). The error seems to be related to compressed FASTQ files, …
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Hello,
I saw that the DropletUtils tool doesn't print the knee and the inflexion point on the [rank barcode plot](https://github.com/galaxyproject/tools-iuc/blob/master/tools/dropletutils/test-data…
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**Describe the bug**
All of the parsers defined in `bibtex-actions-file.el` map over the value `(append bibtex-actions-library-paths bibtex-actions-notes-paths)`. If both of these are set to nil, th…
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The newest version of RepeatMasker 4.1.1 [uses h5py and requires python 3](http://www.repeatmasker.org/RepeatMasker/), but this is not listed in the dependencies.
Since MAKER requires python 2 and …
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`container_mapper_rules.yml` allows you to manually remap tools to specific container overrides, or reassign their default resource allocations. However, because the rules are structured as an array, …
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# New software requested submitted - Galaxy Australia
What type of resource would you like installed? tool
Name and version of software/tool to be installed/updated: Nucmer
Is the tool available fro…
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test command runs as:
planemo test runnable/path tool/path
instead of:
planemo test --galaxy_root=runnable/path tool/path
the runnable that's passed into for_runnable_identifiers is the first no…
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The error that occurred during the download of pfam2go database
Running CMD: wget “[ftp://ftp.geneontology.org/pub/go/external2go/pfam2go ](ftp://ftp.geneontology.org/pub/go/external2go/pfam2go)”
–2…
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e.g. [in cutadapt](https://github.com/galaxyproject/tools-iuc/blob/41371d219eaafc811eadf7646a7f0ecf002e4239/tools/cutadapt/cutadapt.xml#L242) it attempts to collect `out1*` and `out1.fa` exists:
``…