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Hi, Powerful tool for metagenomic data
I am using the tool for metagenomic analysis, but it always reports an error at STEP 16 as shown in the picture
![1](https://user-images.githubusercontent.co…
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Thanks for the --max_len flag. I will try it this evening. I tried the workflow with the test data on my other computer (Ubuntu 18.04). The default database works fine when using v2.0.1 and…
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**Submitting author:** @adrientaudiere (Adrien Taudiere)
**Repository:** https://github.com/adrientaudiere/MiscMetabar
**Branch with paper.md** (empty if default branch):
**Version:** v0.52
**Editor:…
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I got the following error using pb-metagenomics-tools. I tried temporarily disabling the firewall and changing the nameserver address, but it didn't work, so I'm asking this question.
Error in rule…
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This is SYSLOG out
[17 hours, 18 minutes, 44 seconds]: STEP10 -> 10.mapsamples.pl
Creating Bowtie reference: python3 /home/ec2-user/han/20230828_WMS_test_2/SqueezeMeta/bin/bowtie2/bowtie2-build --…
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Hi there,
I am trying to plot my metagenomic data in an nMDS based upon function/KEGGS as per 2.5.2. in the pipeline. My data appears to have two outliers at 2000,3000 and -2000, 3000 on the plot. …
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Hello,
I am new to picrust2 and ggpicrust2.
I have obtained the output files from picrust2 and wanted to analyse using ggpicrust2, however, keep receiving an error using the ggpicrust2 functio…
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faqs/galaxy/histories_create_new.md
and
faqs/galaxy/histories_rename.md
do not render correct
See:
![Selection_007](https://github.com/galaxyproject/training-material/assets/22075451/e321ef5a…
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Hi Javier,
I realized you used TPM (Transcript Per Million) as the count for the abundance of each KEGG function, but I'm confused here because we are dealing with the Whole Genome Metagenome Sequen…
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Hi Francisco,
I recently downloaded metagem, I used the manual installation guideline. I'm trying to run fastp but keep getting this error. I am unsure what could be causing this. I was able to run…