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This error occurred when peptide shaker was attempting to open my searchgui (3.2.7) results. Search was done on 60 files that were brought in as mgf to search against a human database. Search took ~…
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I have followed instructions on the following link on installation and usage of MSnBase.
http://bioconductor.org/packages/release/bioc/vignettes/MSnbase/inst/doc/MSnbase-demo.pdf.
This is the code…
ghost updated
7 years ago
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Have output be "XXXXXXXXX or too many"
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Hey,
Gave a try to MSFragger GUI with std configuration with open search + philosopher. Everything is fine until grouping.
I am using a concatenated target/decoy from uniprot (canonical + isof : s…
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The code in the `addIdentificationData,MSnExp` and `addIdentificationData,MSnSet` methods was essentially duplicated (except when `id` is a `data.frame` - see below). That code has been moved to a set…
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definition: Identifying a protein, e.g. by inference from one or more peptide identifications or other method.
parent: http://edamontology.org/data_0897
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Veit says ... need to add a new EDAM term "spectral library search" at some point
as it is not exactly a synonym for "peptide identification"
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Hi
When it try to load search results from searchGUI into peptide shaker i get this error and it won't load any data. Any ideas how i should proceed?
Thanks
Kim
Wed May 24 15:09:50 CAT 2017…
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Dear Developers,
I face an error while saving, screenshot:
Inline image 1
Essenti…