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This looks like a comprehensive workflow. I'd like to use it to do DE analysis and variant calling for other species, like non-human malaria. What would I need to do to make that happen?
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欢迎您反馈PaddleNLP使用问题,非常感谢您对PaddleNLP的贡献!
在留下您的问题时,辛苦您同步提供如下信息:
- 版本、环境信息
1)PaddleNLP和PaddlePaddle版本:PaddleNLP 2.3.4,paddlepaddle-gpu 2.3.1.post116
2)系统环境:Windows10企业版,python38,cuda11.6,cudnn8.4
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I try to use `clang++` in [`LLVM`](https://releases.llvm.org/) and `mingw32-make` in [`llvm-mingw`](https://github.com/mstorsjo/llvm-mingw/releases) to compile [`glslang`](https://github.com/KhronosGr…
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I'm using STAR 2.7.2b and have been aligning SRA study SRP166889. Unlike others I've done it seems like the reads from this study cause STAR to have a very slow 2nd pass. Take for example from the s…
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Hi,
I was trying to get the ExN50 of my trinity assembly and run into the error message above.
Below is my command:
docker run -v `pwd`:`pwd` trinityrnaseq/trinityrnaseq \
/usr/local/bin/trinityrn…
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Hey
I've been trying to replicate the code using a custom dataset and it worked well for the first few steps then in one of the steps it throws an error from the referenced line (https://github.com/p…
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What is the difference between these two output files - they don't seem to be overlapping 100%:
`flair.diffsplice.es.events.quant.tsv` and `flair.diffsplice.es.events.tsv`
I have noticed that ther…
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## Describe the bug
I recently downloaded the ENCODE RNA-seq pipeline and tried to run it on my dataset, using `caper submit hpc` after configuring caper to slurm following the instructions of [ENC…
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Thank you very much for the CB2 package, it is great and provides us with the quantification of the sgRNA in a very quick and easy way.
When running `run_sgrna_quant` it output the correct count ma…
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roteinlm)xxxx@quant:~/ProteinLM/pretrain$ sh examples/pretrain_tape.sh
using world size: 1, data-parallel-size: 1, tensor-model-parallel size: 1, pipeline-model-parallel size: 1
using torch.float1…