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We currently generate invalid implied alignment. The pre-order traversal of implied alignment algorithm relies on knowing if the current node is the left or right child of it's parent. This informatio…
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Currently, Legate Core only allows tasks to specify alignments between whole Legate stores, which assumes those stores have the same dimensions. This requires dimensions to be added purely for the pur…
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Any thoughts on this?
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Would it be difficult to add a tool that merged alignments produced by GraphAligner for a single sequence back into a single alignment for that sequence? Or does a tool like this already exist?
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#### Feature
See title.
#### Benefit
Correct alignment are necessary to avoid crashes on some architectures and code may depend on correct alignment. In addition rustc checks that the right a…
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I am runing the docker like this:
```
docker run --cpus=20 --memory=25g --memory-swap=30g \
-v "/home/mferreira":"/input" \
-v "/home/mferreira":"/output" \
brentp/smoove smoove call…
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See #165
jplace rereplicated in #201, but rereplication of alignment still not implemented.
wwood updated
8 years ago
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I'm trying to align some sets of images here that were taken freehand and the results I'm getting are quite bad. On the one hand, obviously using a tripod would improve things. On the other hand, I …
ttbek updated
3 years ago
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Dear @mchowdh200 ,
I would like to test your tool to filter SV calls using long-read alignments. As i understood, your model was trained with short-read alignments, correct?
Do you think the mod…
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Hi,
Is it possible to have DRAGMAP report all alignments similar to BWA-MEM with the `-a` option? This seems possible with the different `sec` parameters, but I have not been able to get more than …