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# Version
11.10.0
IntelliJ version:
```
IntelliJ IDEA 2021.3 RC (Ultimate Edition)
Build #IU-213.5744.125, built on November 17, 2021
Runtime version: 11.0.13+7-b1751.19 amd64
VM: OpenJDK 6…
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MToolbox starts running and then gives the following error
Outfile saved on /home/smukherjee/Documents/idp/Output/OUT_R6535_C284PACXX_TCCGGAGA_L005_R1_001/OUT.sam.
Done.
SAM f…
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Hey again :)
Is it possible to add the RealignerTargetCreator and the IndelRealigner from GATK to the pipeline as this always improves our alignments a lot or am I missing an option in the config.y…
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Hello,
I have some question about CLAM. Firstly,as you explained, "--read-tagger-method "will tag a CLIP/RIP read to a particular locus; 'median' tags read center and is recommended for RIP-seq; 'sta…
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Hi, I was working on update the deepvariant source code from ubuntu 16.04 to 18.04 and python 3.6 to python 3.8. Now I met a problem in build_release_binaries.shell scripts.
bazel build -c opt \
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### Summary
After the latest update to 6.8.0.1, buttons for selected options in Rebase dialog are unreadable (almost identical colors for bg/fg)
### Expected behavior
Setting to change the color …
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#### What happens:
-- MOD pokecube_legends ---- MOD pokecube_legends --Details: Caused by 0: java.lang.NoClassDefFoundError: net/minecraftforge/event/entity/living/EntityTeleportEvent at pokecube…
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#### Type of JetBrains IDE (IntelliJ, PyCharm, etc.) and version
IntelliJ IDEA 2020.3.3 (Ultimate Edition)
Build #IU-203.7717.56, built on March 15, 2021
Licensed to Matthew Groth
Subscription i…
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I am running on BAM generated with BWA. The fastq that was used had one reads file with less sequences.
Docker latest image.
/opt/deepvariant/bin/run_deepvariant --model_type WGS --num_shards 5…
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Push and pop has an issue in x64 in that you can only push a full 64bit register. When working with 32bit or smaller values (e.g. i32) this creates a problem with what to do with intermediate calcula…