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I used `spades.py` tool to get the following error, I do not know how to solve?
The command is as follows:
```
graphmb --assembly data/yeast_spades/ --outdir results/yeast_spades/ --assembly_name c…
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I'm putting this ticket here; we can move it to another repo, if need be.
As part of aligning the ontology and GO-CAM data model, we want to make sure that the Noctua curation interfaces and existi…
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https://monarchinitiative.org/gene/FlyBase:FBgn0014445
FlyBase assigns this to be a Scer (yeast) gene, which is of course correct
But this means that we end up with 6 "yeast genes" with nervous syst…
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- [ ] https://github.com/obophenotype/upheno (not possible due to https://github.com/obophenotype/upheno/issues/919)
- [ ] https://monarchinitiative.org/ (not possible due to https://github.com/monar…
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Datasets for gene feature boundaries, or ncRNA
Data type/ details | method | PMID | First/last author | data source | status | Comment
-- | -- | -- | -- | -- | -- | --
intron/spliceosom…
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We are using the scripts which you published on this paper and repeat the m6A calling using EpiNano, with the datasets published on Nature Communication (2019) including Curlcakes and yeast datasets.
…
TTT16 updated
4 months ago
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@ekg
Hi Erik,
As you suggested, I tried different parameter values for PacBio data, something similar to BWA mem.
When I used
```
vg map -k 17 -W 40 -r 10 -q 2 -z 1 -o 1 -y 1 -x yeast.illu…
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hi
Thanks for your work in developing Instanovo. I have installed it on my linux system following the installation instruction. But I encountered problems in using your software. Please help, thank…
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Suggested yeast dataset of interest to me: Ribosome profiling data [GEO: GSE131176](https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE131176).
From *Condensation of Ded1p Promotes a Translation…