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**Preface**: Thanks for creating and maintaining minCED! I use your software often and rely on its output for [my own tools](https://github.com/acvill/CRISPRviewR/#background). I understand this issue…
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# P12002 Duplicated Reads
Inspecting the FastQC and MultiQC reports.
## Overrepresented and duplicated sequences
There are four samples (**_117, _145, _177, _187) that have high sequence duplicat…
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Hi there,
Thank you very much for programming DeltaTE. It is very helpful for studying translation regulation.
Recently, I ran an analysis and got some buffered genes, but it is confusing why th…
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**Have you checked the [list of proposed rules](https://github.com/Benjamin-Lee/deep-rules/issues?q=is%3Aissue+is%3Aopen+label%3Arule) to see if the rule has already been proposed?**
- [x] Yes
…
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> 1. What is the topic of your lesson or lesson proposal?
A comparison among workflow management systems used in the scientific field. The same workflow example (in the field of bioinformatics and …
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Hello Nika,
Can you add the results of Fair on the repository please?
Thank you!
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Dear Fragpipe team,
As always, many thanks for the amazing work you do developing maintaining Fragpipe and all its tools.
Would it be possible to offer intensity grouping by modified sequence?
…
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https://github.com/brouwern/compbio2021/blob/4fc22d26cd66119a177fd9572bd409ffa989216d/KEY-MSA-walkthrough-shroom.Rmd#L391
When we calculate the percent identity of an alignment of 2 sequences ourselv…
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https://github.com/brouwern/compbio2021/blob/4fc22d26cd66119a177fd9572bd409ffa989216d/KEY-MSA-walkthrough-shroom.Rmd#L582
code by Nathan Brouwer, text by David Hall
drh85 updated
3 years ago
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Hi,
We currently use QIAseq RNAFusion XP Assay and corresponding software to call for RNA fusions. Arriba as the second caller helps confirm or identify missing fusions. It performs well with any …