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### Title
Ontology for Biomarkers of Clinical Interest
### Short Description
The Ontology for Biomarkers of Clinical Interest (OBCI) formally defines biomarkers for diseases, phenotypes, and …
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Update the clinical csv to include Health Partner Clinical collections.
Details to come
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Code for identifying pregnancy - could be binary (i.e you are pregnant or not) or could be in trimester
Would need to incorporate looking for codes for 'delivery/birth' or 'miscarriage' or 'termina…
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Pregnancies section not showing up.The clinician can not know whether a mother is or is not pregnant.
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see details in https://github.com/ImagingDataCommons/IDC-ProjectManagement/issues/1394
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Feeding-Related Gut Microbial Composition Associates With Peripheral T-Cell Activation and Mucosal Gene Expression in African Infants - Lianna F Wood – Clinical Infectious Diseases
https://academic…
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TBD
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"Sokal Score" is calculated using following formula:
Exp 0.0116 x (age – 43.4) + 0.0345 x (spleen – 7.51) + 0.1880 x [(platelet count/700)^2-0.563] + 0.0887 x (blasts -2.10)
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**TODO**
- [ ] add functionality to SPHR analyzer to stringify resources.
- [ ] parse .sphr files in implementation guide to have stringified resources
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Gwenlyn pointed out to me today that KG2 is listed as ingesting the **old** biothings-hosted multiomics clinical trials KP (`infores:biothings-multiomics-clinicaltrials`) on this page:
https://gith…