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When running Susie RSS with the following command:
```
fitted_rss
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Hi
I have got an eQTL summury resutls from fastqtl (I have in sample LD matrix, variance of penotype Y) and want to do a fine-mapping task in furthur, I want to know
1. whether the "slope" an…
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Could you share the procedure on how to prepare aFCs? The link you provided is nolonger woking
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Hi there,
Is this repo actively maintained?
http://zarlab.cs.ucla.edu/applying-meta-analysis-to-genotype-tissue-expression-data-from-multiple-tissues-to-identify-eqtls-and-increase-the-number-of…
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Hi, thanks for the amazing R package. I am new to COLOC.
I'm trying to integrate GWAS summary data (dataset 1) and eQTL summary data (dataset 2).
If i understood correctly,
SNPs in dataset 1 an…
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Hello
I have summary statistics for GWAS bipolar disorder. I can see from the input files used for ARCHIE analysis to be correlation matrix files. Did you run correlation analysis with eQTLs summar…
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Hello, Do you have any information about the file format for GWAS summary and eQTL summary statical data? thanks
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Thank for this fine package - very useful in our work on Alzheimer's Disease.
I find intermittent - sometimes lasting - problems with the ftp service the package uses.
Here is an example, establis…
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sQTL analysis with Leafcutter using genotype data from previous Lieber eQTL experiments
- [x] 1. Convert .count files to .junc files
- [x] 2. Cluster introns
- [x] 3. Generate a normalized ratio …
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Hi!
I am trying to import weights from predixcan and fusion and I get an error for each method.
I have the following versions of
pandas 1.3.5
pandas-plink …