-
I loaded up a graph with a 142 bp path in it. I asked to see that path from 1 to 142. I was told that that ran off the end of the 142 bp path, and I had to use 1-141 instead.
We should accept 1-based…
-
Hi
I have tried the web server at https://branchwater.jgi.doe.gov/ many times over the last few days and I have not gotten any results from any of the tries. I did the search using the E. coli K12…
-
### Main steps for adding new genome and annotation collections
# Genus/species/collection names:
- Acacia/crassicarpa/genomes/Acra3RX.gnm1.YX4L
- Acacia/crassicarpa/annotations/Acra3RX.gnm1.ann…
-
Under the "Help" drop-down menu, there is a link to our slack page. The link currently redirects users to our WashU Epigenome Browser slack page. Can we create a WashU Virus Genome Browser slack page …
-
### What you did:
I looked at the GnomAD 4.1 data for variant chr2:79195912-G-T
https://gnomad.broadinstitute.org/variant/2-79195912-G-T?dataset=gnomad_r4
### What happened:
The foot of the …
-
Hello,
I apologize if a similar issue has been posted elsewhere, but I did not find one when I searched.
I am trying to annotate a new reference genome (a marine fish; assembly is near-chromosom…
-
There are a number of low-hanging quality-of-life improvements that **mostly** affect the UI and not core gameplay. I will keep this issue as a living list for these types of features, and mark them o…
-
Hi,
We're using "GCA_000001405.15_GRCh38_no_alt_analysis" as our reference genome build for analysis.
Would the provided build 38 blacklist be suitable to be used with this reference build?
Kin…
-
I was trying to create new indices, but it seems that an error occured.
I used both my own transcript models and those downloaded from the UCSC Genome Browser.
```
You don't seem to have Log::Log4pe…
-
Hi,
Thank you for this great and simple tool!
I'm working with non-human data that which we have found many TAD callers seem to have a high false positive rate on - judging from how it adds up …