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Hoping this isn't a duplicate ticket.
Create a branch with a simplified Jenkinsfile to complete the following tasks:
- [ ] Pull current release human BioPAX file from Reactome
- [ ] Pull curren…
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Hi,
This morning at MGI's weekly GO curator meeting, we were discussing the need for a mechanism to allow curators to trigger a bulk load for one-off cases that arise during curation.
The exampl…
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With models now being handled with get/add/remove operations just like anything else (and with the decision to /not/ move model_id to the batch request level, partially because of this discussion), we…
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I'm not sure if this is a minerva issue or something else, but in a test model, the C. elegans gene pmk-1, is displayed in the table as 'information biomacromolecule' instead of pmk-1.
The label fo…
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- [ ] If the complex is composed of all the same proteins (homomultimers), then use the main uniprot id for the GPAD output (e.g. enabled by). Ignore non-protein entities that are parts of complexes.…
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Hoping to review Monarch association design patterns and identity criteria, as some questions are arising as we get into more complex sources such as ClinVar. G2P associations are non-binary, being re…
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I noticed this morning that in the Reactome models, some identifiers are being displayed as IRIs instead of strings. This is a new issue and I assume that it was introduced with last night's NEO updat…
ukemi updated
2 years ago
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In this [spreadsheet](https://docs.google.com/spreadsheets/d/1bpgF0FpnjbOzfH6bQXPP3ygRpme_MuP6-DOOMdTivu4/edit#gid=776147999) we have all relations used in annotation extensions, at least in WB and MG…
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Currently, the barista_token argument is exposed in all Noctua URLs once logged in. The main downside here is that users often naively try and share models by copying the whole URL, which causes issue…
kltm updated
11 months ago
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Proposal for how this would work.
## Template/Prototype models
- Each template would live in its own model
- The model will be like any other model, but will include some additional owl:annotation tha…