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Hi, the issue for 3d support is still open, but you mention last year that you will support 3d images, is that the case now ?
Best,
Benjamin
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Summarising filetypes currently uses just the suffix (string after last '.'). However, some files have compound extensions e.g. ome.tiff, zarr.zip and ome.zarr.zip. These need to be catered for.
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hello,the original svs has 5 level 80X 40X 20X 10X 5X ,how to make the ome.tiff save 20X rather 80X
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I am using SCIFIO (in FIJI/ImageJ2) to open an OME-TIFF file which specifies the (effective) physical pixel sizes and time resolution in its OME-XML metadata block, e.g.:
``` xml
MyInstitut…
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Hello,
I wanted to convert an MRXS file which has 4 channels and is fluorescent to OME.TIFF, I first went through Bioformats2raw to get a ZARR file which seems to have gone well. Then I wanted to c…
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Make OME-TIFF, .ND2, and CZI importation more robust.
Deployment of latest bioformats library ?
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Hello.
This question is inspired by : https://github.com/libvips/ruby-vips/issues/91
Is there a way to make pyvips.Image.new_from_file() return the dimension of bands and the dimensions of z?
Us…
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Generate artificial pyramid using https://github.com/ome/bioformats/blob/develop/components/formats-gpl/utils/WritePyramid.java and:
```
$ java WritePyramid "0&sizeX=23073&sizeY=36336.fake" "1&siz…
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Somewhere along the way from the CZI file to the OME-TIFF image pyramid that we are displaying in Vitessce, part of the image along the left and along the bottom disappeared.
OME-TIFF file with ima…