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FreeSurfer's subcortical ROIs are purely volumetric. In the focus group, Greg F (Etkin Lab) pointed to [FSL FIRST](http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/FIRST) for surface-based parcellations of subco…
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Aggregate parcels and execute ProForma into this new (bigger) development site to look for increased profitability -in comparison to that of original parcellation-.
**Input**
- Parcels
**Output…
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using all neocortical vertices is computationally expensive and likely unnecessary. Previously we used a schaeffer1000 parcellation, but probably any of the widely used schemes would be fine. Could al…
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Hello,
Would it possible to have more information about the "motions" measures? Indeed, it doesn't seem to be a parcellation technique as described in the project documentation.
Regards,
Vincent
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For the restricted parcellation, we should return the mappings of each region to the coordinates of each new sub-region fragment. We can add this to RegionExtractor probably.
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We are trying to release a few scripts to provide the network label with the network name.
The only problem might be that the network structure could be very different if you are training from scrat…
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Several imaging derivatives were contributed to the UKB by Mansour et al., 2023. bioRvix, doi: [10.1101/2023.03.10.532036](https://doi.org/10.1101/2023.03.10.532036) and [github.com/sina-mansour/UKB-c…
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Will capture further functionalities with referenced Python snippets in this issue
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When downloading parcellation maps from the web application, the download folder contains markdown and text files with too little information:
- description missing
- license missing
- citation m…
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We could add a small Docker/Singularity image to ease up installation, usage and tests. This would include setting up images using [Neurodocker](https://github.com/kaczmarj/neurodocker) and write a sm…