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1. [x] Migrate the total annotations graph from old stats to new stats - "Cumulative annotations by type and year"
2. [x] Remove genes and annotations per paper from old stats - "Annotations/genes fo…
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Started work on this on the [wiki](https://github.com/pombase/pombase-chado/wiki).
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Dear all,
We are adding a new QC check that identifies annotations to retracted publications, and will filter these annotations.
For information, annotations are here:
https://docs.google.co…
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https://github.com/pombase/fypo/issues/4275
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We would like to have a way to specify "x-minus-y" sets of ontology terms when we specify extension relation display text for the website pages in chado-json-config.yaml.
For example, in the Canto …
mah11 updated
4 years ago
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Pdb uses PROMOTIF, we shoud use the same.
see https://www.rcsb.org/sequence/4ro1
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The current README needs work. We need more details on the website part and the "Deploying" section should probably move to the [pombase-chado wiki](https://github.com/pombase/pombase-chado/wiki) (an…
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* **InterPro ID / label**
InterPro:IPR007230
* **Example sequences with problematic annotation (ID + gene/protein name):**
https://www.pombase.org/gene/SPAC2C4.09
* **Description of issue*…
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Whilst
PomBase were looking at this (mainly to find a way to display neighbouring terms in Canto), we thought this looked a little odd.
![amigo_tracker](https://cloud.githubusercontent.com/assets/7…