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Hi,
I am very interested in your excellent work!
I notice that there are only one release of VIA. Is VIA still under maintenance ? And, the plots in the jupytor tutorials are not beautiful, hope…
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https://mp.weixin.qq.com/s/9BOiQ-dHQQYvXpjB72_pTg
ixxmu updated
1 month ago
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Hello Jens,
I tried to use gemoma to annotate the genome and
the input format for gff file is the same as the test data so I don't understand why it didn't work out
java -jar GeMoMa-1.9…
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### Description of feature
Dear authors,
Please can you look into submitting pertpy for a conda implementation. I have tried multiple times to install this within a virtual environment and it cau…
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# Problem
We have been instructed to accept submissions in annData files where gene expression quantifications have been generated by external groups and raw data are not available. We have no cont…
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I tried to store multiple layers in the `.raw` adata (I want to keep both raw UMI counts and normalized, log-transformed counts for plotting). That doesn't seem to be supported at the moment.
1) T…
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Hi,
Sorry for spamming the issues. I am having an error come up whenever I try to add a whitelist.
essentially the run report gives me no additional explanation other than:
failed: 11 at run…
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Hi,
Thanks for creating such a useful tool. I have managed to successfully install `inactiveXX` with all dependencies. I am not able to get it work. I appreciate if you can help me in resolving t…
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Hi,
Thank you for this great tool!
I am testing on my own dataset that came from a Slide-seq experiment, and I have got no spatial domain detected for my data. I have test different parameters …
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https://mp.weixin.qq.com/s/pvbac1nczqN08-HCZbgqNA
ixxmu updated
17 hours ago