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Hi, admin,
I have downloaded and installed the latest version (v0.3.0) Falcon integrated release. The test dry run seemed OK, so I followed the wiki instructions (https://github.com/PacificBioscienc…
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This repository looks fantastic. Would be great to use it at work, but unfortunately after SSHing onto the remote cluster I have to log onto one of our nodes to do the work. I followed your tutorial a…
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Hey!
I am trying to run TOGA on the SGE cluster, which relies on nextflow. My cluster has some relatively specific cluster options (see `clusterOptions`, but the amount of memory needs to be passed…
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**Snakemake version**
5.24.2
**Describe the bug**
When running snakemake with on a cluster, requested threads are not available in Rscripts called by
```script: script/reprex.R'``` but they are …
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Hello,
As a possible addition to the end of the Episode 9, here are some instructions for using 'profiles' functionality for running Snakemake on the cluster (in this case specifically on Eddie …
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```
I have a PBS cluster, and i hope it will support PBS soon
```
Original issue reported on code.google.com by `sf.to...@gmail.com` on 31 Mar 2013 at 1:36
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**Improvement Description**
If extra jobs are being called, setting `n_jobs` separately for the estimator and CV could be the culprit.
**References**
[forum xref](https://forum.qiime2.org/t/class…
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The `submitter` package is an independent unit of code, and can be refactored out.
Suggestion for name `cluster-submitter`
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Hello, I wanted to bring up the performance of ashlar. We use ashlar very heavily in our image pre-processing pipeline, but it's been pretty slow because of its single-threadedness, understandably bec…
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```
I have a PBS cluster, and i hope it will support PBS soon
```
Original issue reported on code.google.com by `sf.to...@gmail.com` on 31 Mar 2013 at 1:36