stxmjh interproscan issues

stxmjh / interproscan

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[interhelp #40928] Included 3rd party dependencies are 32-bit

#62 GoogleCodeExporter opened 9 years ago
1
[interhelp #39550] The match lookup service misses 0.6% of un-integrated signatures

#61 GoogleCodeExporter closed 9 years ago
2
[interhelp #36687] PIRSF HMMER3 raw match parser is storing the wrong evalue

#60 GoogleCodeExporter closed 9 years ago
4
[interhelp #33970] "-f tsv -iprlookup" - tabular output does not include IPR entries

#59 GoogleCodeExporter closed 9 years ago
5
[interhelp #31950] max number of proteins per analysis batch for TMHMM

#58 GoogleCodeExporter closed 9 years ago
7
[interhelp #31898] SGE submission does not happen

#57 GoogleCodeExporter opened 9 years ago
19
[interhelp #31054] Generation of the RAW output format does not work in CONVERT mode

#56 GoogleCodeExporter closed 9 years ago
2
[interhelp #31045] GFF3 output misses the e-value for PANTHER, PROSITE, HAMAP and PRINTS matches

#55 GoogleCodeExporter closed 9 years ago
2
[interhelp #28771] Interproscan speed problem with embedded workers on our system

#54 GoogleCodeExporter closed 9 years ago
12
[interhelp #28703] installation problems in ubuntu 14.04 LTS

#53 GoogleCodeExporter closed 9 years ago
4
[interhelp #28142] Compiling BLAST 2.2.6 Debian

#52 GoogleCodeExporter opened 9 years ago
2
[interhelp #28135] java.lang.OutOfMemoryError: Java heap space

#51 GoogleCodeExporter closed 9 years ago
4
[interhelp #26350] problems running interproscan in clustermode on SGE cluster

#50 GoogleCodeExporter opened 9 years ago
5
[interhelp #25610] InterProScan 5.6-48.0 is using InterPro version 47.0 data only

#49 GoogleCodeExporter closed 9 years ago
1
[interhelp #25609] InterProScan 5.6-48.0 doesn't return any InterPro annotation for PIRSF matches

#48 GoogleCodeExporter closed 9 years ago
2
[interhelp #25063] Missing the 6th field (Signature Description) in tsv output for SUPERFAMILY

#47 GoogleCodeExporter closed 9 years ago
2
[interhelp #24581] temporary directory location not passed to distributed workers

#46 GoogleCodeExporter closed 9 years ago
4
[interhelp #24415] Missing Gene3D matches

#45 GoogleCodeExporter closed 9 years ago
1
[interhelp #24091] libmysqlclient.so.16: cannot open shared object file: No such file or directory

#44 GoogleCodeExporter closed 9 years ago
9
[interhelp #23531] tmhmm interproscan.sh error

#43 GoogleCodeExporter closed 9 years ago
2
Provide functionality which allows to override the location of the interproscan.properties file

#42 GoogleCodeExporter opened 9 years ago
0
[interhelp #23153] multiple instances on same machine fail to finish

#41 GoogleCodeExporter opened 9 years ago
4
[interhelp #22797] interproscan.sh problem

#40 GoogleCodeExporter closed 9 years ago
3
[interhelp #21071] failure likely related to blastall

#39 GoogleCodeExporter closed 9 years ago
8
ncoils fails, kills interproscan on 64 bit fedora 20

#38 GoogleCodeExporter closed 9 years ago
3
downloading /installation issue

#37 GoogleCodeExporter closed 9 years ago
4
Support authenticated proxy servers

#36 GoogleCodeExporter opened 9 years ago
1
[interhelp #15566] problems with running interproscan

#35 GoogleCodeExporter opened 9 years ago
3
[interhelp #14905] Running on LSF-like cluster

#34 GoogleCodeExporter opened 9 years ago
11
Hanging master under certain circumstances in CLUSTER mode

#33 GoogleCodeExporter closed 9 years ago
1
Proxy setup fails

#32 GoogleCodeExporter opened 9 years ago
1
Installation/running problem

#31 GoogleCodeExporter opened 9 years ago
2
HTML output not working in CONVERT mode

#30 GoogleCodeExporter closed 9 years ago
3
Convert mode misbehaves for nucleic acid sequences

#29 GoogleCodeExporter closed 9 years ago
1
interproscan 5RC7

#28 GoogleCodeExporter closed 9 years ago
1
Convert mode fails

#27 GoogleCodeExporter closed 9 years ago
4
For the (-b) option you specified a location which cannot be written to

#26 GoogleCodeExporter closed 9 years ago
5
Override properties defined in interproscan.properties when caling interproscan.sh

#25 GoogleCodeExporter closed 9 years ago
2
Acces denied to dabases - test run

#24 GoogleCodeExporter closed 9 years ago
5
InterProScan 5RC6 with -appl Coils executeInTransaction error

#23 GoogleCodeExporter closed 9 years ago
2
PIRSF fails

#22 GoogleCodeExporter opened 9 years ago
3
[jobPfamA-26.0] fails

#21 GoogleCodeExporter closed 9 years ago
4
RC6 - workers exceed their maximum runtime by far

#20 GoogleCodeExporter closed 9 years ago
5
Schema / DTD of XML output

#19 GoogleCodeExporter closed 9 years ago
2
[interhelp #25958] What cluster does it support? Only LSF?

#18 GoogleCodeExporter opened 9 years ago
24
ips5rc4 combines identical sequences in tsv-output

#17 GoogleCodeExporter closed 9 years ago
4
Attempting to create a Gene3D match that has no alignment data

#16 GoogleCodeExporter closed 9 years ago
13
Feature request: report query sequences with no-hits in output

#15 GoogleCodeExporter opened 9 years ago
3
Feature request: accept stdin

#14 GoogleCodeExporter opened 9 years ago
4
Anotation of a sequence of nucleic acid

#13 GoogleCodeExporter closed 9 years ago
8