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Any hints how to make it work with Cursor? Yes, it's a fork and every single extension works for me so far.
As for the error, looks like server fails to to start. When I add a cell I get this error:
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I implemented gsva on a small bulk RNA dataset and it worked well. However, when I implemented it on a large single-cell dataset along with msigdb genesets, the error occurred. My code and data type …
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## Command
* [x] - executable path as the command head
- example: `~/test.nu arg1 arg2`
* [x] - val_interpolated as the external command head
- example: `^$"($cmd)"`
## Identifier
* [x…
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Dear CellTrek Team
I wonder whether there is a way to force assign all single cells to a spatial location? I tried to change dist_thresh=0.55 to dist_thresh=2, but still didn't get all my single ce…
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Hi!
I am trying to compare mean and noise values between two datasets, one is single cell and one is single nuclei. both runs were performed on the same platform, with identical conditions, and the s…
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Hi! Dr. Dou,
Thank you for developing this great software Monopogen for both germline and somatic SNVs detection in single-cell sequencing data. We found it very efficient in somatic mutations call…
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Please submit your HTML file for the single cell lab. Thanks!
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When I use：
anno = scsa.cell_anno(clustertype='res1', cluster='all', rank_rep=True),
the following error appears.
Setting import sys os.environ["PYTHONIOENCODING"] = "utf-8" does not solve …
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Thank you for developing and maintaining such an excellent python visualization tool.
In some cases, like the heatmap in cell 8 in your [tutorial](https://dingwb.github.io/PyComplexHeatmap/build/html…
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t'would be nice but cannot be done automagically at the moment as you have to create a cell to put it in to a plasm, and some cells have required arguments. So a little thinking to be done there.... …