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Hello Simone,
After running this script:
nohup ./MetONTIIME.sh /home/ihopelab/Microbiome/0809/data/MetONTIIME/KSH_fast5_pass /home/ihopelab/Microbiome/0809/data/MetONTIIME/silva_132_99_16S_sequenc…
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Hi,
Thank you very much for putting together this publication and associated resources (such as [http://cancermycobiome.ucsd.edu/](http://cancermycobiome.ucsd.edu/))!
I think this is more of a "…
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Example: https://mila.quebec/en/publications/
It would be nice to reuse the same code as in the Mila website. Not sure if that's 'easily' possible via RTD
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I need get a taxnomy and otu table which the input from contings , but the atlas create a taxnomy which contain binning ID.
atlas run genomes --skip-binning --resources mem=600 -j 130 is err…
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I would be nice if rarefaction curves could be plotted with phyloseq
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Dear Dr. Benjamin,
I have been reading the DADA2 article of yours published in Nature methods. I am working on a microbiome project in which I need to compare microbiome (16S amplicon) data from two …
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Dear all
I was wondering if there is a way to infer the relative abundance of the detected taxa based on the coverage scores? From my understanding, the "total marker coverage" column in the output…
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https://mp.weixin.qq.com/s/i0Due-eMqa8mrSn5izuQXw
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Dear Tim,
Thanks a lot for solving my previous issue! I successfully ran a first test to the end :)
Please could you help me with 3 new issues/questions that emerged?
1) Is it expected that no…
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| Name | Description | Size | Format | URL |
| --- | --- | --- | --- | --- |
| World Bank - Light Every Night | Light Every Night - World Bank Nightime Light Data – provides open access to all night…