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### Data Owner Name
Human Pangenome Reference Consortium
### Data Owner Country/Region
United States
### Data Owner Industry
Life Science / Healthcare
### Website
https://humanpangenome.org/
#…
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### Data Owner Name
National Human Genome Research Instititue
### Data Owner Country/Region
United States
### Data Owner Industry
Life Science / Healthcare
### Website
https://hu…
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To reproduce (vg commit: a5b6b30d53a9ee7426c60ec7edd4a1c3c4604047 (current master))
```
wget https://s3-us-west-2.amazonaws.com/human-pangenomics/publications/mc_2022/mc_pangenomes/16-fruitfly-pg-20…
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Heya,
I'm running v1.1.4 on some manually curated genomes. Everything was working fine until I added an additional genome and `run_genespace` now experiences a quiet error:
I've attached the out…
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## Describe the issue
When I ran
`vep --dir_cache data/vepcache/ --cache --offline --fasta data/T2T_CHM13/chm13v2.0.fa --gff data/vepcache/chm13v2.0_GENCODEv35_CAT_Liftoff.vep.gff3.gz --symbol -i s…
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Hi, i am trying to run enrichment analysis and i don't know how to solve this problem like category variable ..i mean tried
- avg_gene_length to - total_length option in category variable but it d…
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**Have you checked the FAQ? https://github.com/google/deepvariant/blob/r1.5/docs/FAQ.md**:
yes,i have checked this FAQ document.
**Describe the issue:**
I used Deeprio v1.4.0 version to perform fa…
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**1. What were you trying to do?**
I want to construct spliced pangenome graph and pantranscriptome using T2Tv2.0 genome and corresponding GFF3
T2Tv2.0 link: https://s3-us-west-2.amazonaws.co…
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### Database requests
My genome is available in the Canadian Personal Genome Project as PGPC_0004. I am in the process of reprocessing the dataset against T2T-CHM13_v2.0 at [https://ftp.ncbi.nlm.ni…
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Dear Authors,
Thank you for developing this wonderful tool and providing a very detailed list of the reads data involved in the published paper. However, I found that it's hard to identify the exac…