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I use this AmiGO a lot, but its use is restricted by the fact that you can only use it on whole genome annotation, not on lists.
I think it uses a java library and so presumably for us, would no…
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https://www.pombase.org/reference/PMID:23813957
Any1 Ub ligase adaptor->Aat1 amino acid transporter
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Datasets for gene feature boundaries, or ncRNA
Data type/ details | method | PMID | First/last author | data source | status | Comment
-- | -- | -- | -- | -- | -- | --
intron/spliceosom…
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Legacy annotation is confusing, especially the binding, and modified forms
https://www.pombase.org/reference/PMID:11702950
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Dear all,
The proposal has been made to obsolete GO:0006490 oligosaccharide-lipid intermediate biosynthetic process , and its regulation children,
see https://github.com/geneontology/go-ontology…
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I noticed recently when evaluating linkouts for PomBas that although AmiGo has
link outs from PubMed, it does not have linkouts from ePMC (although GOA does)
eg.
EuropePMC http://europepmc.o…
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I thought we had a ticket for this but I can't find it.
Can we/should we make these datafiles available for download here:
https://www.pombase.org/datasets
https://www.pombase.org/documenta…
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Found in my pending file:
Dear xxx,
Thanks for getting in touch. Usually we can reopen the session for you to add curation.
Unfortunately we cannot capture quantitive copy number in Canto y…
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Dear all,
The proposal has been made to obsolete to GO:0019551 glutamate catabolic process to 2-oxoglutarate
See:
https://github.com/geneontology/go-ontology/issues/15331
(read from the botto…