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## Требуемая возможность
Заменить инструменты подготовки vCard (vcf) на NodeJS.
## Текущее поведение
Сейчас используем PowerShell и Saxon XSLT трансформации.
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Hello, I'm a masters scholar in animal genetics, I tried using sweed for calculation of CLR for detection of selection signatures, but when i saw the output file i.e. report file , its not giving the …
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Hello,
Thanks for maintaining StructuralVariantAnnotation! I'm attempting to convert VCFs to .bedpe files using the following code:
```
vcf
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Augur uses a variety of functions to read VCF files, including TreeTime's `read_vcf` which now includes a lot of validation and helpful error messages. We should shift all our VCF reading to use this …
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Hi Team,
I had a query. I would like to extract which mutations are assigned to which SBS signature for each sample. Is there a way I can do that? I am using sigProfiler Assignment.
Thanks in advanc…
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If the VCF has "CLNSIG=Likely_pathogenic;", it will incorrectly match the _Pathogenic_-rule (which has higher priority than the _Likely pathogenic_-rule, since "Pathogenic" is a substring of "Likely_p…
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We can use hypothesis-vcf to generate VCF files, convert to Zarr with vcf2zarr, then convert back using vcztools - and check that they are equivalent.
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Hi @lrauschning,
when I run `msyd call` in `--core` mode on some potato haplotypes, I get a nice PFF file of the coresyn regions and a merged VCF for the same coresyn. The SNPs and indels which do …
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hi there , i am trying to do some app automation ,
i would like to run restore - push into the phone a vcf file i have , via adb , automatically .
at the moment i was able to pop up the windows …
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https://batch.hail.populationgenomics.org.au/batches/444924/jobs/90
This didn't happen for multisample VCFs 🤷