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Hello,
I keep running into the following error when I try to run the ctx command after completing the GRNboost step.
Most recently I encountered this issue using the following two files as f_db…
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Here's a draft GitHub issue summary that could excite people about the "Gödel Golem" self-bootstrapping AI concept:
**Title: The Gödel Golem - A Novel Path Toward Self-Bootstrapping AGI**
Throughout…
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Hi, Can you provide a reference for the PWM matrices in chrombpnet/data/motifs.meme.txt?
I could not find this info in Nair 2021, but attribution-based diagnosis on the background model, including th…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/smped/motifTestR
Confirm the following by editing…
smped updated
6 months ago
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**Describe what enhancement you'd like to see.**
Yue has requested that the input for `homer` is changed to the `_summit.bed` file. This is being generated during the MACS2 run, but is not being save…
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Link to curation session
http://canto.phi-base.org/curs/bd02fdb6831712ca
Stagonospora nodorum is a necrotrophic fungal pathogen producing host selective toxins/necrotrophic effectors.
In virule…
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hello, thank you for making such a fantastic tool.
I have already tested it with yeast and it works perfectly.
However now I have to use it with my custom genome. I have followed the instructions to…
H1889 updated
3 months ago
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i submit a job based on the anansesnake and doent seem like it's progressing. This is the log file of the job after 120 hours on 6 cores. Similar was after 40 hours using 40 cores.
```touch: canno…
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**Can you please tell me?**
1. Why HOXB6 is only showing changes while LX5 is not?
2. How are you calculating the bigwig score? What is the biological implication of the bigwig score?
3. What doe…
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pctAlt should simply be the min-max scaled binding score. I've ran a simple test whose pctAlt results are different from expected. This makes me wonder how exacly motifbreakR finds the motif in mutate…