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Simon-Coetzee
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motifBreakR
A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.
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copyedits to vignette and README
#55
dennishazelett
closed
2 months ago
0
Error in serialize(data, node$con) : error writing to connection Error in unserialize(node$con) : error reading from connection
#54
yalongan
opened
8 months ago
1
plotMB error :
#53
bioarpit1
closed
3 months ago
10
Adding chr to chromosome names should be an option
#52
stephenturner
opened
1 year ago
0
Error in run motifbreakR
#51
tzhu-bio
closed
3 months ago
1
unexpected pctAlt
#50
lotard
closed
3 months ago
8
Odd Motif Positions
#49
lotard
opened
1 year ago
4
Where is version 2.12.0?
#48
molecules
closed
3 months ago
0
Error loading in VCF file
#47
maggiebr0wn
opened
1 year ago
1
plotMB error: Error in if (doRev) { : the condition has length > 1
#46
jing-wan
closed
3 months ago
4
motifbreakR error SNPs from BED formatted file
#45
sotudian
opened
1 year ago
3
motifbreakR() never returns a result
#44
5Aki1
closed
3 months ago
3
motifbreakR error when set show.neutral = TRUE
#43
hdm2020
closed
3 months ago
3
Any plans to include a p value for the affinity score change between the two alleles?
#42
NCTrailRunner
opened
2 years ago
0
motifbreakR error SNPs from BED formatted file
#41
Seleit
opened
2 years ago
2
motifbreakR with custom motifs
#40
magnitov
closed
2 years ago
3
SNP at RNA level
#39
BenxiaHu
closed
2 years ago
1
Error in running motifBreakR
#38
amootta
opened
2 years ago
1
Cannot load vcf file
#37
Zepeng-Mu
closed
2 years ago
1
How large indels can motifbreakr process?
#36
Minglc
opened
2 years ago
1
parallel execution of calculatePvalue?
#35
paul-shannon
closed
2 years ago
5
logical subscript contains NAs
#34
Addamoo
closed
2 years ago
2
multiple cores do not seem to be used
#33
paul-shannon
closed
2 years ago
3
update shiny version with master updates
#32
Simon-Coetzee
closed
3 years ago
0
plotMB: Error in grid.Call.graphics(C_unsetviewport, as.integer(n))
#31
ellchua
opened
3 years ago
2
SNPs recognized as indels?
#30
Magda-M
opened
3 years ago
0
No motifbreakR Results for chek2 Analysis
#29
DarioS
opened
4 years ago
1
Software Redefines What an Indel is
#28
DarioS
closed
4 years ago
1
Analysis Error Using chek2 Example Data
#27
DarioS
opened
4 years ago
1
VCF Import Fails With Unclear Error
#26
DarioS
opened
4 years ago
0
GRanges Not Great for Variant Storage
#25
DarioS
opened
4 years ago
0
Variants From File Documentation Missing
#24
DarioS
opened
4 years ago
0
motifbreakR error
#23
BenxiaHu
opened
4 years ago
2
GitHub installation error
#22
bschilder
closed
4 years ago
2
plotMB error
#21
bschilder
opened
4 years ago
0
Devel vcf indel
#20
Simon-Coetzee
closed
4 years ago
0
object 'snp.sequence.alt.indel' not found
#19
yfu1116
opened
4 years ago
0
How to interpret the strand column in results?
#18
yfu1116
closed
3 years ago
0
Is it possible to use custom motif database ?
#17
gouthamatla
closed
4 years ago
1
plotMB not working on OSX
#16
firatuyulur
closed
4 years ago
0
snps.from.rsid error to load XtraSNPlocs.Hsapiens.dbSNP144.GRCh37
#15
xinyixinyijiang
opened
5 years ago
2
Only show "?" when using plotMB
#14
danliangunc
closed
3 months ago
1
Find Broken Motifs for a combination of SNPs
#13
YichaoOU
closed
3 months ago
2
snps.from.file error to load bed file.
#12
lwtan90
closed
3 months ago
3
Error with R package motifbreakR while trying to read a vcf file with snps.from.file function
#11
Jasonmbg
opened
6 years ago
0
Too many stacks to draw of plotMB?
#10
xflicsu
closed
3 months ago
6
caught segfault when using plotMB
#9
YiweiNiu
closed
3 months ago
0
Loading VCF using snps.from.file()
#8
ATpoint
closed
3 months ago
1
Error, whilst attempting to use plotMB
#7
Dazcam
closed
3 months ago
2
Strand information
#6
xtmgah
closed
3 months ago
4
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