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Recently, I have tried this method to infer gene co-expression in single-cell RNA-seq data, but I found it was too slow in R, could it be possible to implement it in Python with the input of anndata.
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### Describe the bug?
When using the new settings menu in Beta 2024.4.15.1407, deselecting "Use System Default Output Device" causes a crash.
### To Reproduce
Start Resonite in Desktop Mode
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I've hit what's probably a rare corner case. Circularization completed successfully, but the start position of the chromosome was not set properly. I checked the logs for fixstart and this is what I s…
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Hi,
I'm trying to run the Singularity version of CRISPRCasFinder (version 4.2.20) with the -faa and -gff options (I generated my GFF file using the Dfast annotator, see below), but I'm getting the …
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.NET 5 was released some weeks ago.
It would be awesome to be able to use this library on .NET 5
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The following was reported on crux-users by sy.rodrigo.proteomics@gmail.com
Hi
I have a question about crux percolator. The input file is pepXML format, and I found that in the output make-p…
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When building CopperSpice with `-DCMAKE_INSTALL_INCLUDEDIR=`, the CMake-generated files does not honor the specified headers path. Instead, it always generates CMake files pointing the header files to…
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Hello,
I am part of the team developing Wharf (https://github.com/wharfkit), we've come across an issue where Antelope's ABIs does not provide a mechanism to determine the default or primary index …
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Hi,Ted
when I want to use Atlas-CNV for my target sequence data, I get some result files. They are sample_id.cnv.FAILED_sampleQC_and_sampleANOVA or sample_id.cnv.FAILED_sampleQC. Do they mean that …
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Hi guys, hope the week is going well!
As per the title, prodigal v2.6.3 is predicting genes across N stretches even when supplied with the `-m` flag. According to the documentation `-m` should make…