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Hi thanks for developing, updating and being responsive.
NLR-Annotator v2 installs and works really great for me, especially when compared to other options out there.
I have a few questions about…
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Add these genomes to Genomic Resources page
https://robertslab.github.io/resources/Genomic-Resources/
Pocillopora verrucosa genome v1.0 : http://pver.reefgenomics.org/ : https://www.ncbi.nlm.nih.g…
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**What can't you do right now?**
Gzip supports having 'multi-member' gzip files, where essentially gzip files are concatenated one after the other.
This is used in certain formats, such as W…
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Dear IGV developers,
Thank you for the very nice IGV software.
We would like the visualize the content of CRAM files on large reference genomes in IGV.
For example Wheat and Onion both have …
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Currently, the jekyll sites link to JBrowse2 by just going to the main entrypoint page, befuddling some users who are more used to the traditional "when I ask to see a genome browser I get a genome" s…
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Should switch the nomenclature of Desc strings in gff3 outputs to eliminate 'Name', use cluster ids as 'ID' to eliminate issues with downstream automating indexing by genome browsers.
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We have a few more stragglers to generate RNA-Seq for. We'll need to do the mapping per the usual documentation, and add the data to the browsers on the servers.
| Species name | Assembly to use |…
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Downloading and Processing hs38d1 No Alt + 2385 hs38d1 Decoys (1K; @US NIH)
DL% UL% Dled Uled Xfers Live Qd Total Current Left Speed
99 -- 833M 0 1 1 0 0:07:20 0:0…
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Dear IGV team
We have data available in https://zenodo.org/record/7113924 of which we would like to share the visualisation via https://igv.org/app/
I tried it out with Dropbox a while ago and it …
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See https://gitlab.com/i5k_Workspace/workspace_roadmap/-/wikis/Adding-an-organism-CWL-update for full description of each task (requires gitlab login)
- assembly accession number: GCF_023864275.1
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