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### Summary
Hello,
This is a public issue for a virtual daily stand-up. We will use this to briefly share the tasks of the day and the challenges and advances made, so that we can ensure smooth su…
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A user reported a potential bug in the `run-ngs-pipeline` command where if the user provides an empty VCF, the command will throw an error complaining the VCF is empty when it should handle this type …
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Hi,
Is there a newer version covering more genes, other than CYP2D6?
I found a related newsletter from Illumina.
Thank you
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Hi,
what does it mean if the program output looks like this:
> CYP2D6 Star Allele Calling with StellarPGx
> Initially computed CN = 17
> Sample core variants:
> 42126611C>G1/1;42127941G>A0/1;42…
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Hi David, I am investigating your program, and try to understand core algorithms.
Could you please explain why do you have additional "av_5pr_in1" region in "scripts/cyp2d6/b37/bin/sv_modules.py" f…
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Hi @twesigomwedavid I need to generates the results for all genes present in CYP450 family for that i did the iteration in python script :-
''' Iterate CYP450 genes over SteallrPGx nextflow workflow'…
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Hello,
I wanted to ask if Cyrius yields "None" for the phenotype, is it the same as declaring "Indeterminate" for the gene's metabolizer status? I wanted to test concordance with another program!
…
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Hi, I enjoyed your article very much. Now I am trying to apply Cyrius software tool on analyzing CYP2D6 gene for my research. However, while I was trying to run the tool, I faced an error that I canno…
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Hi,
I tried Aldy using 'vdr' gene region as -n instead of CYP2D8 default region. Below is the command I ran.
$aldy genotype -p illumina -g cyp2d6 -n 12:47811535-47945000 -o $out $bam
My Bam f…
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**Describe the bug**
When using a Zairachem Classification Model, if the prediction dataset contains regression values, it tries to use a regressor model and crashes.
I think this only happens when …