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The current version of the `/mml/amr` endpoint is unable to handle the following pMML produced from Lotka-Volterra equation images by the `/image/mml` endpoint:
```json
{
"mathml": [
" …
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---
id: vcell
version: 7.5.0.127
specificationsUrl: https://github.com/virtualcell/vcell/releases/download/7.5.0.127/biosimulators.json
specificationsPatch:
version: 7.5.0.127
image:
url: ghcr…
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---
id: vcell
version: 7.5.0.121
specificationsUrl: https://github.com/virtualcell/vcell/releases/download/7.5.0.121/biosimulators.json
specificationsPatch:
version: 7.5.0.121
image:
url: ghcr…
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I paste the head sample of the latest Arizona extraction (format A) for 1-s2.0-S2211379721005490-main. This is totally different from the format of extraction [sample](https://github.com/ml4ai/ASKEM-T…
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First of all: thanks for the fantastic package. I specially appreciate how much cleaner the syntax is as compared to NeuralPDE.
Following the ODE tutorial (Lotka-Volterra), this line throws an erro…
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We had a discussion on what should shown in the model page of Terarium.
Can we make sure that all the properties^ of "model" have at least:
1. an unique string that works a short name for this prop…
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---
id: vcell
version: 7.5.0.108
specificationsUrl: https://github.com/virtualcell/vcell/releases/download/7.5.0.108/biosimulators.json
specificationsPatch:
version: 7.5.0.108
image:
url: ghcr…
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I'm running pysindy in the context of reaction-diffusion equations for biological chemicals. I am using pysindy on data to infer Lotka-Volterra ODEs with spatial diffusion. However, I am running into …
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Whilst we support discrete variables and (in theory) you can use optas for mixed-integer optimization, there does not exist a dedicated `Optimization` sub-class for handling this specific use-case. It…
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I started taking a look at making a JSON format for RegNets. This takes some ideas from our already existing Petri Net schema such as grounding and how we represent rates/initial conditions and applie…