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Hi, I recently tried to run the EB differentiation PHATE tutorial. The tutorial is run in python, but I am more used to R, so I tried to run using RunPHATE() function implemented in seurat ( https://g…
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Hola,
Is it possible to use lda {MASS}? Can you please provide an example?
Thanks
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I was preparing some examples for my classes and for me it seems that JAMOVI / jmv has difficulties computing the correct initial eigen values in factor analysis (compared to fa() from psych toolbox b…
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Hi Team Zinc,
Here is some feedback on your progress report. Your TA mentor will also provide some feedback, as well as the results of marking.
* The revised division of labour seems imbalanced.…
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library(shiny)
library(ggplot2)
ui
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## Predicting poverty and wealth from mobile phone metadata
Joshua Blumenstock, Gabriel Cadamuro, Robert On
![image](https://user-images.githubusercontent.com/543384/89919942-73f0f900-dc2e-11e…
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- [ ] `Bond.__eq__` does not check bond order in ``core.topologyobjects``:
https://github.com/MDAnalysis/mdanalysis/blob/e1101089ffc7aa58be654f7d0a82840a9d5a7175/package/MDAnalysis/core/topologyobjec…
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Hi, sorry if this was already addressed in a previous issue-- I was not able to source a solution to this. I ran Harmony on a relatively large (~21k cells) merged Seurat v4 object with the following c…
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I was able to use the fastMNN integration back in February, and now it's reporting errors when I run it. Same data, the R package used to be like 5.0? it seems to have been automatically upgraded to 5…
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- [x] Remove usage of `autoplot()`, which caused some confusion
- [x] instead explain what the `prcomp` object is and how to extract things from it "manually"
- [ ] use `top_n()` to get top PC loadi…