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Hi @ramou @simaataei
I was able to run Toot-BertT easily given its straightforward installation but how can I run ToT-Bert_ICAT? Are you still writing executables like `run.py` or something that w…
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Had successfully built GPU environment and the alphafold docker image (AlphaFold V2.3.2) on the Centos8.
**When I run the alphafold by the following command:**
python3 docker/run_docker.py…
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I have come across to code to possibly streamline this notebook.
We should look at updating and making this notebook more robust..
https://github.com/RobertsLab/code/blob/master/10-blast-2-slim.i…
sr320 updated
5 years ago
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I can't find this complex in Noctua:
ComplexAc: CPX-566
Even though it has been in our GPI since 2024-05-04
Can you let us know of we are doing anything wrong in the file or is a Noctua load…
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Hi Protein Folding team. After I ran the cloud formation stack per link provided in the readme, I opened a SageMaker JupyterLab session and than ran the instructions to do manual load per instruction…
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Objectives of the tool:
- Create a subdirectory to store the essential information (files) needed for review
- Create a Tiered and Annotated report table that makes it more clear which fusion cand…
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http://pmd.ddbj.nig.ac.jp/~pmd/pmd.html
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Hi,
Recently I have installing cat, I think I had installed everthing except little bit wrong with Augustus (I got it from bioconda, version 3.3.2, but I think it cannot config as you said). When I…
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## Describe the issue
when using transcript annotations defined in GFF file, VEP performed incorrect HGVS.p annotation for the variant chr10:87754701-CAT-C，NM_032810.4:c.1070_1071del (rs751499706)
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I'm aiming to generate protein graphs in bulk in order to then perform unsupervised clustering on them. I would also like to repeat this process on several different proteomes.
I would also like…