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Single-cell RNA-seq with spike-in cells enables accurate quantification of cell-specific drug effects in pancreatic islets
https://doi.org/10.1186/s13059-020-02006-2
Data: https://www.ncbi.nlm.nih.…
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Dear Professor,
I have a question how can I use the 6.5 PCW human embryonic heart dataset in another Model? For example, I want to use the CARD technique, it requires two types of input data:
1. s…
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Provide trainings with details about the algorithms of the main analysis to help user really understand what is happening .
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Kindly comment on this issue why you are interested in this mini-project
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Single-cell/nucleus datasets typically contain matched FASTQ files, in groups of 2 for RNA-seq and some ATAC-seq assays, and 3 for other ATAC-seq data types. (RNA-seq contains 2 more files per group, …
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I have been following this script ([Introduction to Data Input and Preprocessing in scPagwas.Rmd](https://github.com/dengchunyu/scPagwas/blob/main/vignettes/Introduction%20to%20Data%20Input%20and%20Pr…
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Hi Dr. Wang,
I have just read your paper "A mouse model with high clonal barcode diversity for joint lineage,
transcriptomic, and epigenomic profifiling in single cells" and fairly interested in the…
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This issue is to explore the overview of Bioinformatics
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Hi developers,
Nice method and code/documentation! I was wondering how feasible is to apply ANANSE to single-cell multiomics data (RNA+ATAC):
- For scalability, should I pseudobulk cells by cell…
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https://blog.catkin.moe/2020/10/16/Hydro-Seq%20enables%20contamination-free%20high-throughput%20single-cell%20RNA-sequencing%20for%20circulating%20tumor%20cells/
一种